The detailed information of tRNA gene sequence


Sequence ID>WENV170670518
Genome IDLAHT01031469
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 2360
End posion on genome 2283
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cctcccgggc
tRNA gene sequence 
GGGACAGTAGGGTAGCCTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACTGCGGTTCAA
ATCCGCGCTGTCCCACCA
Downstream region at tRNA end position 
aatgcctttt
Secondary structure (Cloverleaf model)
>WENV170670518	Pro	TGG
                   c      ACCA aatgcctttt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        A      + | | | |     A
  T         T G G G       T G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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