The detailed information of tRNA gene sequence


Sequence ID>WENV170670519
Genome IDLAHT01031641
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 298
End posion on genome 227
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
actgcatcca
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGTTACGTTCGCAACGTAAAGGCCACGGGTTCAAATC
CCGTCGAGTCCAtcg
Downstream region at tRNA end position 
cacctttcct
Secondary structure (Cloverleaf model)
>WENV170670519	Ala	CGC
                   a      Atcg cacctttcct
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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