The detailed information of tRNA gene sequence


Sequence ID>WENV170670563
Genome IDLAHT01046144
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 113
End posion on genome 39
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacggcactt
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAATCC
CAGTACCGCCTACCA
Downstream region at tRNA end position 
ttttacatcc
Secondary structure (Cloverleaf model)
>WENV170670563	Val	CAC
                   t      ACCA ttttacatcc
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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