The detailed information of tRNA gene sequence


Sequence ID>WENV170670682
Genome IDLAHT01122005
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 94
End posion on genome 18
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgaaaatccc
tRNA gene sequence 
GGGCGGGTAGCTCAGTTGGTTAGAGCGCATCGCTTACACCGATGAGGTCGCAGGTTCGAG
TCCTGTTCTGCCCACAA
Downstream region at tRNA end position 
gttgaatttt
Secondary structure (Cloverleaf model)
>WENV170670682	Val	TAC
                   c      ACAA gttgaatttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     G + T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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