The detailed information of tRNA gene sequence


Sequence ID>WENV170670686
Genome IDLAHT01123347
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 227
End posion on genome 155
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccaaaatggt
tRNA gene sequence 
GCCCGAGTGGCGCAACGGTAGCGCAACCGACTTGTAATCGGTAGGTTAGCGGGTTCGAGT
CCCCTCTCGGGCTtgg
Downstream region at tRNA end position 
gcctattttt
Secondary structure (Cloverleaf model)
>WENV170670686	Thr	TGT
                   t      Ttgg gcctattttt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T C C C C     A
        A A        G      +   | | |     G
      C     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTTA
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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