The detailed information of tRNA gene sequence


Sequence ID>WENV170670689
Genome IDLAHT01125724
Search identical group
Phylum/Class[LAHT] activated sludge metagenome; Sample C-4; Sludge from methanogenic chamber (fourth chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 395
End posion on genome 325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atacattcat
tRNA gene sequence 
GCCGAGATGACCGAGTGGCTAGGTGCGTGGCTGCAGACCACGATACTTGGGTTCAAATCC
CAATCTCGGCCttg
Downstream region at tRNA end position 
taagtaaaat
Secondary structure (Cloverleaf model)
>WENV170670689	Cys	GCA
                   t      Cttg taagtaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A A C C C     A
        G A        G      | | | | |     A
      T     G C C A       T T G G G     C
      G       | | |                 T T
      G     A G G T
        C T        G     ATAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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