The detailed information of tRNA gene sequence


Sequence ID>WENV170670725
Genome IDLAHU01000018
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 33661
End posion on genome 33585
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actcgctatT
tRNA gene sequence 
GGGACAGTGGGGTAGCCTGGTCTATCCTCGAGGGTTTGGGACTCTTGGACCGCGGTTCGA
ATCCGCGCTGTCCCATtt
Downstream region at tRNA end position 
aatcagatca
Secondary structure (Cloverleaf model)
>WENV170670725	Pro	TGG
                   T      ATtt aatcagatca
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        G      | | | | |     G
  T         T G G G       C G C G G     C
  G           | | +                 T T
  G         T C C T
    T C T A        C     GGAC
                    G + T
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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