The detailed information of tRNA gene sequence


Sequence ID>WENV170670732
Genome IDLAHU01000058
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 6962
End posion on genome 7036
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctgccgga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGATATCCCGACGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTAttt
Downstream region at tRNA end position 
ttgattttta
Secondary structure (Cloverleaf model)
>WENV170670732	Met	CAT
                   a      Attt ttgattttta
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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