The detailed information of tRNA gene sequence


Sequence ID>WENV170670734
Genome IDLAHU01000103
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 22480
End posion on genome 22403
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgcccaaaac
tRNA gene sequence
AGCGAGGTGGGGTAGTCAGGATATCCCGACGGGCTCATAACCCGTAGATCGATGGTTCAA
ATCCATCCCTCGCTATCA
Downstream region at tRNA end position
ccaggcgctc
Secondary structure (Cloverleaf model)
>WENV170670734	Met	CAT
                   c      ATCA ccaggcgctc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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