The detailed information of tRNA gene sequence


Sequence ID>WENV170670736
Genome IDLAHU01000125
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 11758
End posion on genome 11833
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcttccat
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCCGGCTCATAACCGGGCGGTCATGCGTTCAA
ATCGCATCGGGCCCACtt
Downstream region at tRNA end position 
taaatccctc
Secondary structure (Cloverleaf model)
>WENV170670736	Met	CAT
                   t      ACtt taaatccctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
    C T G A        A      | | | | |     A
  C         T T C G       A T G C G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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