The detailed information of tRNA gene sequence


Sequence ID>WENV170670739
Genome IDLAHU01000138
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 24142
End posion on genome 24057
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagattctct
tRNA gene sequence 
GTTGAGGTAGCCAAGCCAGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCTTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtc
Downstream region at tRNA end position 
cagaagaatt
Secondary structure (Cloverleaf model)
>WENV170670739	Ser	GCT
                   t      GCtc cagaagaatt
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    A       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCTTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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