The detailed information of tRNA gene sequence


Sequence ID>WENV170670750
Genome IDLAHU01000351
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 7328
End posion on genome 7256
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cgcctgtgac
tRNA gene sequence 
GGATCCATGGGGTAGAGGATATCCTCTTGGGCTTCGGACCCAAGGACGCGGGTTCGATTC
CCGCTGGGTCCGCtt
Downstream region at tRNA end position 
ttctcctctc
Secondary structure (Cloverleaf model)
>WENV170670750	Arg	TCG
                   c      GCtt ttctcctctc
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      T A          C     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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