The detailed information of tRNA gene sequence


Sequence ID>WENV170670761
Genome IDLAHU01000545
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 17689
End posion on genome 17773
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgttattcgg
tRNA gene sequence 
GCCGGGGTAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCACTGGTGCCCAGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGtga
Downstream region at tRNA end position 
taacgccaat
Secondary structure (Cloverleaf model)
>WENV170670761	Ser	TGA
                   g      Gtga taacgccaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTGCCCAGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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