The detailed information of tRNA gene sequence


Sequence ID>WENV170670764
Genome IDLAHU01000616
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 4679
End posion on genome 4755
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cacaatgtgt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGTATCTGAATGGGGTTCAGAGGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttccagttt
Secondary structure (Cloverleaf model)
>WENV170670764	Pro	GGG
                   t      ACCA tttccagttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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