The detailed information of tRNA gene sequence


Sequence ID>WENV170670769
Genome IDLAHU01000700
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 475
End posion on genome 546
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcgcctatt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTACCACTCCGGTTCGAATC
CGGACCTTGGCTttc
Downstream region at tRNA end position 
tttaaatttg
Secondary structure (Cloverleaf model)
>WENV170670769	Cys	GCA
                   t      Tttc tttaaatttg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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