The detailed information of tRNA gene sequence


Sequence ID>WENV170670776
Genome IDLAHU01000913
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1754
End posion on genome 1839
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttatatggtT
tRNA gene sequence 
GCGGGGTTCGCCAAGCTGGCCAAAGGCGCAGGACTTAAGATCCTGTCTCGCAGGAGTTCG
CGGGTTCGAATCCCGTACCCCGCATta
Downstream region at tRNA end position 
aacctttttc
Secondary structure (Cloverleaf model)
>WENV170670776	Leu	TAA
                   T      ATta aacctttttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T C G A        C      + | | | |     G
  G         A C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCTCGCAGGAGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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