The detailed information of tRNA gene sequence


Sequence ID>WENV170670785
Genome IDLAHU01001108
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1546
End posion on genome 1459
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gcatcctttt
tRNA gene sequence 
GCGGGGATTGCCAAGCCAGGTCAAAGGCGCTGGATTCAGGGTCCAGTCACGAAGGTGTTC
GTGGGTTCGAATCCCATTCCCCGCACCT
Downstream region at tRNA end position 
atttactagt
Secondary structure (Cloverleaf model)
>WENV170670785	Leu	CAG
                   t      ACCT atttactagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
    C C G A        T      + | | | |     G
  A         A C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCACGAAGGTGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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