The detailed information of tRNA gene sequence


Sequence ID>WENV170670787
Genome IDLAHU01001147
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1257
End posion on genome 1184
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
caggatcatT
tRNA gene sequence 
GGGCTTGTAGATCAGTGGTAGATCGCCGCCTTCGCAAGGCGGAGGCCACGGGTTCAAATC
CCGTCAAGTCCATtc
Downstream region at tRNA end position 
ccatcaagtc
Secondary structure (Cloverleaf model)
>WENV170670787	Ala	CGC
                   T      ATtc ccatcaagtc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      T     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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