The detailed information of tRNA gene sequence


Sequence ID>WENV170670791
Genome IDLAHU01001366
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 5770
End posion on genome 5695
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
caggcaattt
tRNA gene sequence 
GCTGCTATAGTGTAGTCCGGCCAATCATGCGGGCCTCTCACGCCCGCGACTGGGGTTCGA
ATCCCCATAGCAGCACtt
Downstream region at tRNA end position 
ttaattttgt
Secondary structure (Cloverleaf model)
>WENV170670791	Glu	CTC
                   t      ACtt ttaattttgt
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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