The detailed information of tRNA gene sequence


Sequence ID>WENV170670792
Genome IDLAHU01001420
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 8606
End posion on genome 8678
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtggctcgaa
tRNA gene sequence 
GGGCAGGTAGATCAGCTGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAAT
CCCGACCTGTCCAtta
Downstream region at tRNA end position 
gcctgttgta
Secondary structure (Cloverleaf model)
>WENV170670792	Ala	GGC
                   a      Atta gcctgttgta
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       T C G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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