The detailed information of tRNA gene sequence


Sequence ID>WENV170670793
Genome IDLAHU01001487
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 6439
End posion on genome 6353
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ccggcaagaa
tRNA gene sequence 
GCCCAGATGGCGAAATTGGTAGACGCGCTAGTTTCAGGGACTAGTGTCAGCAATGATGTG
CAGGTTCGAGTCCTGTTCTGGGCACCA
Downstream region at tRNA end position 
caaaccacgc
Secondary structure (Cloverleaf model)
>WENV170670793	Leu	CAG
                   a      ACCA caaaccacgc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCAGCAATGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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