The detailed information of tRNA gene sequence


Sequence ID>WENV170670810
Genome IDLAHU01001686
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3937
End posion on genome 3860
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cctcccgggc
tRNA gene sequence 
GGGACAGTAGGGTAGCCTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACTGCGGTTCAA
ATCCGCGCTGTCCCACCA
Downstream region at tRNA end position 
aatgcctttt
Secondary structure (Cloverleaf model)
>WENV170670810	Pro	TGG
                   c      ACCA aatgcctttt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        A      + | | | |     A
  T         T G G G       T G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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