The detailed information of tRNA gene sequence


Sequence ID>WENV170670813
Genome IDLAHU01001779
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 4379
End posion on genome 4306
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcataaaaag
tRNA gene sequence 
GGGCTTGTAGCTTAGTTCGGCAGAGCGACGGACTCTTAATCCGTAGGTCAAGGGTTCAAA
TCCCTTCAGGCCCGttt
Downstream region at tRNA end position 
ctgcttttca
Secondary structure (Cloverleaf model)
>WENV170670813	Lys	CTT
                   g      Gttt ctgcttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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