The detailed information of tRNA gene sequence


Sequence ID>WENV170670821
Genome IDLAHU01001920
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 490
End posion on genome 564
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
tcgaaagccg
tRNA gene sequence
GGGGATATAGCTCAGCTGGCTAGAGCGGCGGCTTTGCAAGCCGTAGGTCAGGGGTTCGAA
TCCCCTTATCTCCACgt
Downstream region at tRNA end position
agtggcgccc
Secondary structure (Cloverleaf model)
>WENV170670821	Ala	TGC
                   g      ACgt agtggcgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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