The detailed information of tRNA gene sequence


Sequence ID>WENV170670822
Genome IDLAHU01001944
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 9370
End posion on genome 9455
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttcgaatagg
tRNA gene sequence 
GCGGGGGTAACCAAGCCAGGTCAACGGTGATAGACTCAAGATCTATTCTCGCAGGAGTTC
AAGGGTTCGAATCCCTTCCCCCGCACtt
Downstream region at tRNA end position 
atttaccagt
Secondary structure (Cloverleaf model)
>WENV170670822	Leu	CAA
                   g      ACtt atttaccagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     G
  A         A C C A       A A G G G     C
  G           | | |                 T T
  G         C G G T
    T C A A        G     TCTCGCAGGAGTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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