The detailed information of tRNA gene sequence


Sequence ID>WENV170670838
Genome IDLAHU01002204
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 19830
End posion on genome 19904
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctttcctcc
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTGAGAGCGCCCGGCTCATAACCGGGCGGTCATGCGTTCAA
ATCGCATCGGGCCCAttc
Downstream region at tRNA end position 
caatcattct
Secondary structure (Cloverleaf model)
>WENV170670838	Met	CAT
                   c      Attc caatcattct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
    C T G A        A      | | | | |     A
  C         T T C G       A T G C G     C
  G         + | | |                 T T
  G         G A G C
    T G A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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