The detailed information of tRNA gene sequence


Sequence ID>WENV170670874
Genome IDLAHU01003093
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3588
End posion on genome 3663
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggcggaatt
tRNA gene sequence 
GGGCGCGTGGCCTAGTCAGGATAAGGCGGCAGCCTCCTAAGCTGTAGATCGGGGGTTCGA
ATCCCTCTGCGCCCGCtt
Downstream region at tRNA end position 
gttttttgat
Secondary structure (Cloverleaf model)
>WENV170670874	Arg	CCT
                   t      GCtt gttttttgat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  A         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          G     AGATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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