The detailed information of tRNA gene sequence


Sequence ID>WENV170670882
Genome IDLAHU01003268
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 6411
End posion on genome 6338
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctaaagagcT
tRNA gene sequence 
GCCCTGGTGGTGTAGGGGCTATCATGCGGGCCTGTCGAGCCCGCGACTCGGGTTCAAATC
CCGGCCAGGGCGTtt
Downstream region at tRNA end position 
ggggcccgta
Secondary structure (Cloverleaf model)
>WENV170670882	Asp	GTC
                   T      GTtt ggggcccgta
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        G      + | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      T A          G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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