The detailed information of tRNA gene sequence


Sequence ID>WENV170670891
Genome IDLAHU01003448
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 11578
End posion on genome 11649
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
actgcatcca
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGTTACGTTCGCAACGTAAAGGCCACGGGTTCAAATC
CCGTCGAGTCCAtcg
Downstream region at tRNA end position 
cacctttcct
Secondary structure (Cloverleaf model)
>WENV170670891	Ala	CGC
                   a      Atcg cacctttcct
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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