The detailed information of tRNA gene sequence


Sequence ID>WENV170670903
Genome IDLAHU01003771
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 167
End posion on genome 241
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
attctggcat
tRNA gene sequence 
GCCGGGATAGGGTAGTGGCTATCCTGAGGGACTGTGGATCCCTCGAGCTGGGTTCGAATC
CCGGTCCCGGCCCCT
Downstream region at tRNA end position 
tattactgat
Secondary structure (Cloverleaf model)
>WENV170670903	His	GTG
                   t      CCCT tattactgat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        A      | + | | |     G
    G       T G G G       C T G G G     C
    G         | | +                 T T
    C       T C C T
      T A          G     CGAG
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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