The detailed information of tRNA gene sequence


Sequence ID>WENV170670908
Genome IDLAHU01004112
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 209
End posion on genome 283
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggatgtttac
tRNA gene sequence 
AGTCCCGTAGCTCAGTTGGTTAGAGCACTACACTGATAATGTAGGGGTCAGCAGTTCAAG
TCTGCTCGGGACTACtc
Downstream region at tRNA end position 
aaaaagcgtt
Secondary structure (Cloverleaf model)
>WENV170670908	Ile	GAT
                   c      ACtc aaaaagcgtt
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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