The detailed information of tRNA gene sequence


Sequence ID>WENV170670931
Genome IDLAHU01005270
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 72
End posion on genome 147
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gagggtgcgG
tRNA gene sequence 
GCCTCGGTGGCTCAGCTGGCTAGAGCGAGTGACTTGTAATCACTAGGTCGCGTGTTCGAA
TCACGCCCGGGGCTTaa
Downstream region at tRNA end position 
ataatctata
Secondary structure (Cloverleaf model)
>WENV170670931	Thr	TGT
                   G      TTaa ataatctata
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C A C     A
      C G A        G      | | | | |     G
    T       C T C G       G C G T G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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