The detailed information of tRNA gene sequence


Sequence ID>WENV170670940
Genome IDLAHU01005641
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 797
End posion on genome 723
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tttctggcgc
tRNA gene sequence 
GCCGGGATAGGGTAGTGGTTATCCTGAGGGACTGTGGATCCCTCGAGCTGGGTTCGAATC
CCGGTCCCGGCCCCT
Downstream region at tRNA end position 
taatatttgc
Secondary structure (Cloverleaf model)
>WENV170670940	His	GTG
                   c      CCCT taatatttgc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        A      | + | | |     G
    G       T G G G       C T G G G     C
    G         | | +                 T T
    T       T C C T
      T A          G     CGAG
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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