The detailed information of tRNA gene sequence


Sequence ID>WENV170670943
Genome IDLAHU01005645
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 907
End posion on genome 981
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttcaatcc
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTAAGAGCGCCCGGCTCATAACCGGGCGGTCATGCGTTCAA
ATCGCATCGGGCCCAtta
Downstream region at tRNA end position 
ttttctggca
Secondary structure (Cloverleaf model)
>WENV170670943	Met	CAT
                   c      Atta ttttctggca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
    C T G A        A      | | | | |     A
  C         T T C G       A T G C G     C
  G         + | | |                 T T
  G         G A G C
    T A A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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