The detailed information of tRNA gene sequence


Sequence ID>WENV170670944
Genome IDLAHU01005749
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 8969
End posion on genome 8882
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgcctctttt
tRNA gene sequence 
GCGGGGGTTGCCAAGCCAGGTCAAAGGCGCTGGATTCAGGGTCCAGTCACGAAGGTGTTC
GTGGGTTCGAATCCCATCCCCCGCACCT
Downstream region at tRNA end position 
aattactagg
Secondary structure (Cloverleaf model)
>WENV170670944	Leu	CAG
                   t      ACCT aattactagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C C G A        T      + | | | |     G
  A         A C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCACGAAGGTGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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