The detailed information of tRNA gene sequence


Sequence ID>WENV170670959
Genome IDLAHU01006409
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 7000
End posion on genome 7072
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ggtatattct
tRNA gene sequence 
GCCAGGGTGGGGTAGTTGGTCATCCTAGGGGACTGTGGATCCCCCGACCCGGGTTCGAGT
CTCGGCCCTGGCCtcc
Downstream region at tRNA end position 
ctttattttc
Secondary structure (Cloverleaf model)
>WENV170670959	His	GTG
                   t      Ctcc ctttattttc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     G G C T C     A
      T G A        G      | | | + |     G
    T       T G G G       C C G G G     C
    G         | | +                 T T
    G       T C C T
      T C A        A     CGAC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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