The detailed information of tRNA gene sequence


Sequence ID>WENV170670982
Genome IDLAHU01007115
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 341
End posion on genome 266
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccaaaagaa
tRNA gene sequence 
GGGCGCGTGGCCTAGTCAGGATAAGGCGGCAGCCTCCTAAGCTGTAGATCGGGGGTTCGA
ATCCCTCTGCGCCCGCtt
Downstream region at tRNA end position 
gctttttatt
Secondary structure (Cloverleaf model)
>WENV170670982	Arg	CCT
                   a      GCtt gctttttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  A         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          G     AGATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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