The detailed information of tRNA gene sequence


Sequence ID>WENV170670993
Genome IDLAHU01007473
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 151
End posion on genome 78
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taactaatgA
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCTCCCTTGGCTTta
Downstream region at tRNA end position 
aatcattaaa
Secondary structure (Cloverleaf model)
>WENV170670993	Cys	GCA
                   A      TTta aatcattaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      A     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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