The detailed information of tRNA gene sequence


Sequence ID>WENV170671006
Genome IDLAHU01008067
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2110
End posion on genome 2181
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccgcccagc
tRNA gene sequence 
GGGCCGGTAGATCAGGGGTAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAATC
CCGACCGGTCCAtgg
Downstream region at tRNA end position 
ggattctctc
Secondary structure (Cloverleaf model)
>WENV170671006	Ala	GGC
                   c      Atgg ggattctctc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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