The detailed information of tRNA gene sequence


Sequence ID>WENV170671020
Genome IDLAHU01008465
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1109
End posion on genome 1183
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaggctgcc
tRNA gene sequence 
GGGCCCGTAGCTTAGCATGGTTGGAGCGCACGGCTGATAACCGTGAGGTCACGCGTTCGA
ATCGCGTCGGGCCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170671020	Ile	GAT
                   c      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
    A C G A        A      | | | | |     G
  T         T T C G       A C G C G     C
  G         + | | |                 T T
  G         G A G C
    T T G          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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