The detailed information of tRNA gene sequence


Sequence ID>WENV170671028
Genome IDLAHU01008930
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 203
End posion on genome 278
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtcgagttgT
tRNA gene sequence 
GGGCCTGTAGTTCAGTTGGCTAGAACGCTTCATTTGCAATGAAGAGGTCAGGAGTTCGAC
TCTCCTCAGGTCCATat
Downstream region at tRNA end position 
gtttacggaa
Secondary structure (Cloverleaf model)
>WENV170671028	Ala	TGC
                   T      ATat gtttacggaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T T G       A G G A G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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