The detailed information of tRNA gene sequence


Sequence ID>WENV170671032
Genome IDLAHU01009364
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3972
End posion on genome 4049
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcggagtagc
tRNA gene sequence 
GGGCCCGTGGCTTAGCCAGGATATAGCACCGGGCTTCTAACCCGGGGGTCGTGGGTTCGA
ATCCCACCGGGTCCGCCT
Downstream region at tRNA end position 
gctacttaaa
Secondary structure (Cloverleaf model)
>WENV170671032	Arg	TCT
                   c      GCCT gctacttaaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  A         T T C G       G T G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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