The detailed information of tRNA gene sequence


Sequence ID>WENV170671042
Genome IDLAHU01009599
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1112
End posion on genome 1187
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
taggttccga
tRNA gene sequence 
AGCCCGGTAGTGTAGCGGTCAATCACAGGAGGCTCTGGACCTCCTTACCTAGGTTCGAAT
CCTGGCCGGGCTACTA
Downstream region at tRNA end position 
tcttctatga
Secondary structure (Cloverleaf model)
>WENV170671042	Gln	CTG
                   a      ACTA tcttctatga
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G T C C     A
      C G A        A      | + | | |     G
    G       T G T G       C T A G G     C
    G         | | |                 T T
    T       T C A C
      C A A        A     TTAC
                    G - C
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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