The detailed information of tRNA gene sequence


Sequence ID>WENV170671051
Genome IDLAHU01010086
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1308
End posion on genome 1382
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acccatgtgg
tRNA gene sequence 
GGACCCATGGGGTAGAGGACATCCTTTTGGGCTTCGAACCCAAGGACGCGGGTTCAATTC
CCGCTGGGTCCGTCA
Downstream region at tRNA end position 
gttcttccgg
Secondary structure (Cloverleaf model)
>WENV170671051	Arg	TCG
                   g      GTCA gttcttccgg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      A G A        G      | | | | |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      C A          T     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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