The detailed information of tRNA gene sequence


Sequence ID>WENV170671055
Genome IDLAHU01010477
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2474
End posion on genome 2561
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atggggccag
tRNA gene sequence 
GTCGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTTCGGGACTC
GAGGGTTCGAATCCCTCCCTCGGCGCTA
Downstream region at tRNA end position 
attttctcaa
Secondary structure (Cloverleaf model)
>WENV170671055	Ser	GCT
                   g      GCTA attttctcaa
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTTCGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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