The detailed information of tRNA gene sequence


Sequence ID>WENV170671064
Genome IDLAHU01010551
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3562
End posion on genome 3490
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cccctcaatt
tRNA gene sequence 
GCCGGGGTGGGGTAGTTGGTTATCCTACGGGACTGTGGATCCCGCGACTCGGGTTCGAAT
CTCGGCCCCGGCCttc
Downstream region at tRNA end position 
ttcttaatat
Secondary structure (Cloverleaf model)
>WENV170671064	His	GTG
                   t      Cttc ttcttaatat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
      T G A        G      + | | + |     G
    T       T G G G       T C G G G     C
    G         | | +                 T T
    G       T C C T
      T T A        A     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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