The detailed information of tRNA gene sequence


Sequence ID>WENV170671067
Genome IDLAHU01010580
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 421
End posion on genome 497
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaaccttaa
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTTAGAGCGCGCGCCTGATAAGCGCGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
gagcaccttg
Secondary structure (Cloverleaf model)
>WENV170671067	Ile	GAT
                   a      ACCA gagcaccttg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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