The detailed information of tRNA gene sequence


Sequence ID>WENV170671075
Genome IDLAHU01010757
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 412
End posion on genome 484
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gcccacttga
tRNA gene sequence 
GCCCAAGTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAATGTCCCCGGTTCGAGT
CCGGGTTTGGGCAtat
Downstream region at tRNA end position 
ttttacctgt
Secondary structure (Cloverleaf model)
>WENV170671075	Phe	GAA
                   a      Atat ttttacctgt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     G + T          T G
                    T     G G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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