The detailed information of tRNA gene sequence


Sequence ID>WENV170671078
Genome IDLAHU01011171
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1379
End posion on genome 1294
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gaggccgcaa
tRNA gene sequence 
GCGGGGGTTGCCAAGTGGTTAAAGGCGCAGGGCTTAGGACCCTGTCACGAAGGTGTTCGC
GGGTTCGACTCCCGTCCCCCGCACTA
Downstream region at tRNA end position 
ctatcgctcc
Secondary structure (Cloverleaf model)
>WENV170671078	Leu	TAG
                   a      ACTA ctatcgctcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     T G C C C     A
      T G A        T      + | | | |     G
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A A        G     TCACGAAGGTGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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