The detailed information of tRNA gene sequence


Sequence ID>WENV170671097
Genome IDLAHU01012777
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 315
End posion on genome 244
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcgcctatt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTACCACTCCGGTTCGAATC
CGGACCTTGGCTttc
Downstream region at tRNA end position 
tttaattgag
Secondary structure (Cloverleaf model)
>WENV170671097	Cys	GCA
                   t      Tttc tttaattgag
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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